Planning

Week Mon. 13 Tue. 14 Wed. 15 List

	Mon. 13	Tue. 14	Wed. 15
09:00 10:00 11:00 12:00 13:00 14:00 15:00 16:00 17:00 18:00 19:00 20:00 21:00 22:00 23:00	Welcome and general introduction 13:20 - 13:40 (20min) Welcome and general introduction Amphitheatre Dorothy Hodgkin The organizers C-BASC: AgroEcology and Biodiversity at Paris-Saclay 13:40 - 14:00 (20min) C-BASC: AgroEcology and Biodiversity at Paris-Saclay Amphitheatre Dorothy Hodgkin Paul Leadley Special Topic: Adaption, Invasive Species 14:00 - 15:40 (1h40) Special Topic: Adaption, Invasive Species Amphitheatre Dorothy Hodgkin Chairwoman: A. Genissel › Anthropogenic hybridization in the sea: Lessons from Ciona ascidians, and the way forward - Frédérique Viard, Institut des Sciences de l'Evolution de Montpellier 14:00-14:40 (40min) › Deep estimation of the intensity and timing of selection from ancient genomes - Guillaume Laval, Human Evolutionary Genetics, CNRS UMR2000 14:40-15:00 (20min) › Ménage à trois: introductions, endemism, and hybridisation in Australian Mytilus - Cynthia Riginos, The University of Queensland, Tjärnö Marine Laboratory, University of Gothenburg 15:00-15:20 (20min) › Genomic parallelism and ecological divergence in two tropical drosophilids simultaneously invading a desert environment - Amir Yassin, Évolution, Génomes, Comportement et Écologie 15:20-15:40 (20min) Coffee break 15:40 - 16:10 (30min) Coffee break Espace de convivialité Emmy Noether Special Topic: Adaption, Invasive Species Other contributed talks 16:10 - 17:10 (1h) Special Topic: Adaption, Invasive Species Amphitheatre Dorothy Hodgkin Chairman: A. Le Rouzic › Fluctuating selection on bacterial iron regulation in the mammalian gut - Hugo Barreto, Instituto Gulbenkian de Ciência 16:10-16:30 (20min) › The evolution of GC-biased gene conversion by means of natural selection - Nicolas Lartillot, Laboratoire de Biométrie et Biologie Evolutive - UMR CNRS 5558 16:30-16:50 (20min) 16:50 - 17:50 (1h) Other contributed talks Amphitheatre Dorothy Hodgkin Chairman: A. Le Rouzic › The impact of codon usage from bicistronic mRNA on their transcriptomic, post-transcriptomic and proteomic regulation in human cells - Philippe Paget, Maladies infectieuses et vecteurs : écologie, génétique, évolution et contrôle 16:50-17:10 (20min) › A new theory for the evolution of sex chromosomes - Tatiana Giraud, Ecologie Systématique Evolution, IDEEV, CNRS, Université Paris-Saclay, AgroParisTech, Bâtiment 680, 12 route RD128, 91190 Gif-sur-Yvette 17:10-17:50 (40min) Buffet and Poster Session 18:00 - 22:30 (4h30) Buffet and Poster Session Espace de convivialité Emmy Noether	Special Topic: Biodiversity 9:30 - 10:50 (1h20) Special Topic: Biodiversity Amphitheatre Dorothy Hodgkin Chairman: V. Castric › Deep learning models to infer biodiversity from spatial data, fossils, and genomes - Daniele Silvestro, Department of Biology [Fribourg] 09:30-10:10 (40min) › A genome-wide segmentation approach for the detection of selection footprints - Tristan Mary-Huard, Génétique Quantitative et Evolution - Le Moulon (Génétique Végétale) 10:10-10:30 (20min) › On the erosion of microbial biodiversity - Benoît Perez-Lamarque, Institut de biologie de l'ENS Paris 10:30-10:50 (20min) Coffee break 10:50 - 11:20 (30min) Coffee break Espace de convivialité Emmy Noether Special Topic: Biodiversity 11:20 - 12:40 (1h20) Special Topic: Biodiversity Amphitheatre Dorothy Hodgkin Chairwoman: N. Vazeux-Blumental › The genome of the blind bee louse fly reveals deep convergences with its social host and illuminates Drosophila origins - Héloïse Bastide, Évolution, Génomes, Comportement et Écologie 11:20-11:40 (20min) › The impact of selfish genetic elements on speciation of neotropical Drosophila flies - Wolfgang Miller, Medical University of Vienna 11:40-12:00 (20min) › Demographic inference from radiocarbon data - Miguel De Navascués, Centre de Biologie pour la Gestion des Populations, Uppsala Universitet, Human Evolution 12:00-12:20 (20min) › Phylogenomic insights into inter-algal HGT across the global ocean - Richard Dorrell, Biologie Computationnelle et Quantitative = Laboratory of Computational and Quantitative Biology, Institut de biologie de l'ENS Paris 12:20-12:40 (20min) Lunch 12:40 - 13:30 (50min) Lunch Visit of IDEEV 13:30 - 14:40 (1h10) Visit of IDEEV Quick tour of the organizing institute. The tour may include greenhouses, experimental fields, bee hives, insectarium and office spaces. Other contributed talks 14:40 - 16:20 (1h40) Other contributed talks Amphitheatre Dorothy Hodgkin Chairman: S. Boitard › Regulatory signature of plasticity - Apolline Petit, Évolution, Génomes, Comportement et Écologie 14:40-15:00 (20min) › RIDGE, a flexible tool to detect gene flow barriers - Sylvain Glémin, ECOBIO-UMR 6553 15:00-15:20 (20min) › Genomes streamlining: effect of mutation rate and population size on genome size reduction - Juliette Luiselli, Artificial Evolution and Computational Biology 15:20-15:40 (20min) › Impact of the acquired subgenome on the transcriptional landscape in Brettanomyces bruxellensis allopolyploids - Arthur JALLET, Génétique moléculaire, génomique, microbiologie 15:40-16:00 (20min) › Dynamics and change in fitness effects of mutations through long-term bacterial evolution - Olivier Tenaillon, Infection, Antimicrobiens, Modélisation, Evolution, [Institut Cochin] Departement Infection, immunité, inflammation 16:00-16:20 (20min) Coffee break 16:20 - 16:50 (30min) Coffee break Espace de convivialité Emmy Noether Other contributed talks 16:50 - 18:30 (1h40) Other contributed talks Amphitheatre Dorothy Hodgkin Chairman: A. Le Meur › Quantification of Selection against Neoantigen Formation in Human Cancer Tumors - Théotime Grohens, Centro de Regulación Genómica - Alexandros Gelastopoulos, Universitat Pompeu Fabra [Barcelona] 16:50-17:10 (20min) › The fate of a suppressed X-linked meiotic driver: experimental evolution in Drosophila simulans - Pierre GERARD, Génétique Quantitative et Evolution - Le Moulon (Génétique Végétale) 17:10-17:30 (20min) › Forward-in-time simulation of chromosomal rearrangements: The invisible backbone that sustains long-term adaptation - guillaume beslon, BEAGLE, Laboratoire d'InfoRmatique en Image et Systèmes d'information 17:30-17:50 (20min) › The evolutionary history and functional specialization of miRNA genes in Arabidopsis halleri and A. lyrata. - Vincent CASTRIC, Évolution, Écologie et Paléontologie (Evo-Eco-Paleo) - UMR 8198 17:50-18:10 (20min) › Post-endosymbiotic innovations for protein import and regulation of gene expression in mitochondria and chloroplast - Ingrid Lafontaine, Institut de biologie physico-chimique 18:10-18:30 (20min) Conference dinner -- Brass'n Co 19:00 - 23:00 (4h) Conference dinner -- Brass'n Co https://etee2023.sciencesconf.org/data/program/Screenshot_2023_05_15_at_15.27.34.png	Special Topic: Agroecology 9:30 - 10:50 (1h20) Special Topic: Agroecology Amphitheatre Dorothy Hodgkin Chairwoman: M. Tenaillon › Invited Speaker - Germain Montazeaud, Université de Lausanne 09:30-10:10 (40min) › Impact of host competition in varietal mixture on pathogen virulence : a modeling approach - Alban Fesquet, Génétique Quantitative et Evolution - Le Moulon 10:10-10:30 (20min) › The maize-bean association, first insights from intercropping experiments - Noa Vazeux-Blumental, Génétique Quantitative et Evolution - Le Moulon (Génétique Végétale) 10:30-10:50 (20min) Coffee break 10:50 - 11:20 (30min) Coffee break Espace de convivialité Emmy Noether Other contributed talks 11:20 - 12:00 (40min) Other contributed talks Amphitheatre Dorothy Hodgkin Chairwoman: A. Petit › To be defined - Anne Genissel, BIOlogie et GEstion des Risques en agriculture 11:20-11:40 (20min) › Weak genetic draft and the Lewontin's paradox - Guillaume Achaz, Centre interdisciplinaire de recherche en biologie 11:40-12:00 (20min) Closing speech 12:00 - 12:10 (10min) Closing speech Amphitheatre Dorothy Hodgkin Guillaume Achaz Optional Packed Lunch 12:10 - 14:00 (1h50) Optional Packed Lunch Espace de convivialité Emmy Noether

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